Nonuniform sliding-window reconstruction for accelerated dual contrast agent quantification with MR fingerprinting

MAGMA. 2024 Apr;37(2):273-282. doi: 10.1007/s10334-023-01140-9. Epub 2024 Jan 13.

Abstract

Objective: MR fingerprinting (MRF) can enable preclinical studies of cell tracking by quantifying multiple contrast agents simultaneously, but faster scan times are required for in vivo applications. Sliding window (SW)-MRF is one option for accelerating MRF, but standard implementations are not sufficient to preserve the accuracy of T2*, which is critical for tracking iron-labelled cells in vivo.

Purpose: To develop a SW approach to MRF which preserves the T2* accuracy required for accelerated concentration mapping of iron-labelled cells on single-channel preclinical systems.

Methods: A nonuniform SW was applied to the MRF sequence and dictionary. Segments of the sequence most sensitive to T2* were subject to a shorter window length, preserving the T2* sensitivity. Phantoms containing iron-labelled CD8+ T cells and gadolinium were used to compare 24× undersampled uniform and nonuniform SW-MRF parameter maps. Dual concentration maps were generated for both uniform and nonuniform MRF and compared.

Results: Lin's concordance correlation coefficient, compared to gold standard parameter values, was much greater for nonuniform SW-MRF than for uniform SW-MRF. A Wilcoxon signed-rank test showed no significant difference between nonuniform SW-MRF and gold standards. Nonuniform SW-MRF outperformed the uniform SW-MRF concentration maps for all parameters, providing a balance between T2* sensitivity of short window lengths, and SNR of longer window lengths.

Conclusions: Nonuniform SW-MRF improves the accuracy of matching compared to uniform SW-MRF, allowing higher accelerated concentration mapping for preclinical systems.

Keywords: T 2*; Iron; MR fingerprinting; Preclinical; Quantitative MRI; Sliding window.

MeSH terms

  • Algorithms
  • Brain*
  • Contrast Media*
  • Image Processing, Computer-Assisted
  • Iron
  • Magnetic Resonance Imaging
  • Phantoms, Imaging

Substances

  • Contrast Media
  • Iron