Homeodomain proteins hierarchically specify neuronal diversity and synaptic connectivity

Elife. 2024 Jan 5:12:RP90133. doi: 10.7554/eLife.90133.

Abstract

How our brain generates diverse neuron types that assemble into precise neural circuits remains unclear. Using Drosophila lamina neuron types (L1-L5), we show that the primary homeodomain transcription factor (HDTF) brain-specific homeobox (Bsh) is initiated in progenitors and maintained in L4/L5 neurons to adulthood. Bsh activates secondary HDTFs Ap (L4) and Pdm3 (L5) and specifies L4/L5 neuronal fates while repressing the HDTF Zfh1 to prevent ectopic L1/L3 fates (control: L1-L5; Bsh-knockdown: L1-L3), thereby generating lamina neuronal diversity for normal visual sensitivity. Subsequently, in L4 neurons, Bsh and Ap function in a feed-forward loop to activate the synapse recognition molecule DIP-β, thereby bridging neuronal fate decision to synaptic connectivity. Expression of a Bsh:Dam, specifically in L4, reveals Bsh binding to the DIP-β locus and additional candidate L4 functional identity genes. We propose that HDTFs function hierarchically to coordinate neuronal molecular identity, circuit formation, and function. Hierarchical HDTFs may represent a conserved mechanism for linking neuronal diversity to circuit assembly and function.

Keywords: D. melanogaster; DIP-β; developmental biology; feed-forward loop; homeodomain; lamina; neuronal diversity; synaptic connectivity.

MeSH terms

  • Animals
  • Brain
  • Drosophila
  • Drosophila Proteins* / genetics
  • Homeodomain Proteins* / genetics
  • Neurons
  • POU Domain Factors
  • Transcription Factors / genetics

Substances

  • Homeodomain Proteins
  • Transcription Factors
  • Pdm3 protein, Drosophila
  • Drosophila Proteins
  • POU Domain Factors

Associated data

  • GEO/GSE246726
  • GEO/GSE190714