Response to Commentary: Accounting for diverse transposable element landscapes is key to developing and evaluating accurate de novo annotation strategies
Genome Biol
.
2024 Jan 2;25(1):6.
doi: 10.1186/s13059-023-03119-0.
Authors
Shujun Ou
1
,
Ning Jiang
2
,
Candice N Hirsch
3
,
Matthew B Hufford
4
Affiliations
1
Department of Molecular Genetics, Ohio State University, Columbus, OH, 43210, USA.
2
Department of Horticulture, Michigan State University, East Lansing, MI, 48824, USA.
3
Department of Agronomy and Plant Genetics, University of Minnesota, Saint Paul, MN, 55108, USA. cnhirsch@umn.edu.
4
Department of Ecology, Evolution, and Organismal Biology, Iowa State University, Ames, IA, 50011, USA.
PMID:
38169403
PMCID:
PMC10762968
DOI:
10.1186/s13059-023-03119-0
No abstract available
Keywords:
Annotation; Benchmarking; Transposabel Element.
Publication types
Letter
MeSH terms
DNA Transposable Elements*
Genomics*
Molecular Sequence Annotation
Substances
DNA Transposable Elements