Structure of the Portal Complex from Staphylococcus aureus Pathogenicity Island 1 Transducing Particles In Situ and In Isolation

J Mol Biol. 2024 Feb 15;436(4):168415. doi: 10.1016/j.jmb.2023.168415. Epub 2023 Dec 21.

Abstract

Staphylococcus aureus is an important human pathogen, and the prevalence of antibiotic resistance is a major public health concern. The evolution of pathogenicity and resistance in S. aureus often involves acquisition of mobile genetic elements (MGEs). Bacteriophages play an especially important role, since transduction represents the main mechanism for horizontal gene transfer. S. aureus pathogenicity islands (SaPIs), including SaPI1, are MGEs that carry genes encoding virulence factors, and are mobilized at high frequency through interactions with specific "helper" bacteriophages, such as 80α, leading to packaging of the SaPI genomes into virions made from structural proteins supplied by the helper. Among these structural proteins is the portal protein, which forms a ring-like portal at a fivefold vertex of the capsid, through which the DNA is packaged during virion assembly and ejected upon infection of the host. We have used high-resolution cryo-electron microscopy to determine structures of the S. aureus bacteriophage 80α portal itself, produced by overexpression, and in situ in the empty and full SaPI1 virions, and show how the portal interacts with the capsid. These structures provide a basis for understanding portal and capsid assembly and the conformational changes that occur upon DNA packaging and ejection.

Keywords: DNA packaging; bacteriophage; capsid assembly; cryo-electron microscopy; genetic mobilization.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Capsid Proteins / chemistry
  • Cryoelectron Microscopy
  • DNA Packaging
  • Genomic Islands*
  • Humans
  • Nucleic Acid Conformation
  • Staphylococcus Phages* / genetics
  • Staphylococcus aureus* / genetics
  • Staphylococcus aureus* / pathogenicity
  • Staphylococcus aureus* / virology
  • Transduction, Genetic
  • Virulence Factors / genetics

Substances

  • Capsid Proteins
  • Virulence Factors