Identification of the CONSTANS-like family in Cymbidium sinense, and their functional characterization

BMC Genomics. 2023 Dec 18;24(1):786. doi: 10.1186/s12864-023-09884-3.

Abstract

Background: Cymbidium sinense is an orchid that is typically used as a potted plant, given its high-grade ornamental characteristics, and is most frequently distributed in China and SE Asia. The inability to strictly regulate flowering in this economically important potted and cut-flower orchid is a bottleneck that limits its industrial development. Studies on C. sinense flowering time genes would help to elucidate the mechanism regulating flowering. There are very few studies on the genetic regulation of flowering pathways in C. sinense. Photoperiod significantly affects the flowering of C. sinense, but it was unknown how the CONSTANS gene family is involved in regulating flowering.

Results: In this study, eight CONSTANS-like genes were identified and cloned. They were divided into three groups based on a phylogenetic analysis. Five representative CsCOL genes (CsCOL3/4/6/8/9) were selected from the three groups to perform expression characterization and functional study. CsCOL3/4/6/8/9 are nucleus-localized proteins, and all five CsCOL genes were expressed in all organs, mainly in leaves followed by sepals. The expression levels of CsCOL3/4 (group I) were higher in all organs than other CsCOL genes. Developmental stage specific expression revealed that the expression of CsCOL3/4/9 peaked at the initial flowering stage. In contrast, the transcript level of CsCOL6/8 was highest at the pedicel development stage. Photoperiodic experiments demonstrated that the transcripts of the five CsCOL genes exhibited distinct diurnal rhythms. Under LD conditions, the overexpression of CsCOL3/4 promoted early flowering, and CsCOL6 had little effect on flowering time, whereas CsCOL8 delayed flowering of Arabidopsis thaliana. However, under SD conditions, overexpression of CsCOL4/6/8 promoted early flowering and the rosette leaves growth, and CsCOL3 induced flower bud formation in transgenic Arabidopsis.

Conclusion: The phylogenetic analysis, temporal and spatial expression patterns, photoperiodic rhythms and functional study indicate that CsCOL family members in C. sinense were involved in growth, development and flowering regulation through different photoperiodic pathway. The results will be useful for future research on mechanisms pertaining to photoperiod-dependent flowering, and will also facilitate genetic engineering-based research that uses Cymbidium flowering time genes.

Keywords: CONSTANS-like; Cymbidium sinense; Flowering time; Functional analysis; Photoperiod.

MeSH terms

  • Arabidopsis Proteins* / genetics
  • Arabidopsis* / metabolism
  • Circadian Rhythm
  • DNA-Binding Proteins / genetics
  • Flowers
  • Gene Expression Regulation, Plant
  • Photoperiod
  • Phylogeny
  • Plant Proteins / genetics
  • Plant Proteins / metabolism
  • Transcription Factors / metabolism

Substances

  • Arabidopsis Proteins
  • Plant Proteins
  • CONSTANS protein, Arabidopsis
  • DNA-Binding Proteins
  • Transcription Factors