A highly sensitive colorimetric DNA sensor for MicroRNA-155 detection: leveraging the peroxidase-like activity of copper nanoparticles in a double amplification strategy

Mikrochim Acta. 2023 Dec 15;191(1):32. doi: 10.1007/s00604-023-06087-1.

Abstract

A novel and highly sensitive colorimetric DNA sensor for determination of miRNA-155 at attomolar levelsis presented that combines the peroxidase-like activity of copper nanoparticles (CuNPs) with the hybridization chain reaction (HCR) . The utilization of CuNPs offers advantages such as strong interaction with double-stranded DNA, excellent molecular recognition, and mimic catalytic activity. Herein, a capture probe DNA (P1) was immobilized on carboxylated magnetic beads (MBs), allowing for amplified immobilization due to the 3D surface. Subsequently, the presence of the target microRNA-155 led to the formation of a sandwich structure (P2/microRNA-155/P1/MBs) when P2 was introduced to the modified P1/MBs. The HCR reaction was then triggered by adding H1 and H2 to create a super sandwich (H1/H2)n. Following this, Cu2+ ions were attracted to the negatively charged phosphate groups of the (H1/H2)n and reduced by ascorbic acid, resulting in the formation of CuNPs, which were embedded into the grooves of the (H1/H2)n. The peroxidase-like activity of CuNPs catalyzed the oxidation reaction of 3,3',5,5'-Tetramethylbenzidine (TMB), resulting in a distinct blue color measured at 630 nm. Under optimal conditions, the colorimetric biosensor exhibited a linear response to microRNA-155 concentrations ranging from 80 to 500 aM, with a detection limit of 22 aM, and discriminate against other microRNAs. It was also successfully applied to the determination of microRNA-155 levels in spiked human serum.

Keywords: Bio-assay; Colorimetric detection; Copper nanoparticles; Hybridization chain reaction; MicroRNA-155; Nanozyme.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Colorimetry / methods
  • Copper / chemistry
  • DNA / chemistry
  • DNA / genetics
  • Humans
  • Limit of Detection
  • Metal Nanoparticles* / chemistry
  • MicroRNAs*
  • Peroxidases

Substances

  • Copper
  • DNA
  • MicroRNAs
  • Peroxidases
  • MIRN155 microRNA, human