BioMOBS: A multi-omics visual analytics workflow for biomolecular insight generation

PLoS One. 2023 Dec 14;18(12):e0295361. doi: 10.1371/journal.pone.0295361. eCollection 2023.

Abstract

One of the challenges in multi-omics data analysis for precision medicine is the efficient exploration of undiscovered molecular interactions in disease processes. We present BioMOBS, a workflow consisting of two data visualization tools integrated with an open-source molecular information database to perform clinically relevant analyses (https://github.com/driesheylen123/BioMOBS). We performed exploratory pathway analysis with BioMOBS and demonstrate its ability to generate relevant molecular hypotheses, by reproducing recent findings in type 2 diabetes UK biobank data. The central visualisation tool, where data-driven and literature-based findings can be integrated, is available within the github link as well. BioMOBS is a workflow that leverages information from multiple data-driven interactive analyses and visually integrates it with established pathway knowledge. The demonstrated use cases place trust in the usage of BioMOBS as a procedure to offer clinically relevant insights in disease pathway analyses on various types of omics data.

MeSH terms

  • Diabetes Mellitus, Type 2*
  • Humans
  • Multiomics
  • Software*
  • Workflow

Grants and funding

DH and JP are funded through Hasselt University BOF grants (BOF20OWB29 \& BOF20OWB33). D.H. also receives funding from VITO NV (R-11362). The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript.