PABP-driven secondary condensed phase within RSV inclusion bodies activates viral mRNAs for ribosomal recruitment

Virol Sin. 2024 Apr;39(2):235-250. doi: 10.1016/j.virs.2023.12.001. Epub 2023 Dec 9.

Abstract

Inclusion bodies (IBs) of respiratory syncytial virus (RSV) are formed by liquid-liquid phase separation (LLPS) and contain internal structures termed "IB-associated granules" (IBAGs), where anti-termination factor M2-1 and viral mRNAs are concentrated. However, the mechanism of IBAG formation and the physiological function of IBAGs are unclear. Here, we found that the internal structures of RSV IBs are actual M2-1-free viral messenger ribonucleoprotein (mRNP) condensates formed by secondary LLPS. Mechanistically, the RSV nucleoprotein (N) and M2-1 interact with and recruit PABP to IBs, promoting PABP to bind viral mRNAs transcribed in IBs by RNA-recognition motif and drive secondary phase separation. Furthermore, PABP-eIF4G1 interaction regulates viral mRNP condensate composition, thereby recruiting specific translation initiation factors (eIF4G1, eIF4E, eIF4A, eIF4B and eIF4H) into the secondary condensed phase to activate viral mRNAs for ribosomal recruitment. Our study proposes a novel LLPS-regulated translation mechanism during viral infection and a novel antiviral strategy via targeting on secondary condensed phase.

Keywords: Biomolecular condensates; Inclusion bodies (IBs); Liquid-liquid phase separation (LLPS); Respiratory syncytial virus (RSV); Secondary condensed phase; mRNA activation.

MeSH terms

  • A549 Cells
  • Eukaryotic Initiation Factor-4G / metabolism
  • Humans
  • Inclusion Bodies, Viral* / metabolism
  • Poly(A)-Binding Proteins / genetics
  • Poly(A)-Binding Proteins / metabolism
  • RNA, Messenger* / genetics
  • RNA, Messenger* / metabolism
  • RNA, Viral* / genetics
  • RNA, Viral* / metabolism
  • Respiratory Syncytial Virus, Human / genetics
  • Respiratory Syncytial Virus, Human / physiology
  • Ribonucleoproteins* / genetics
  • Ribonucleoproteins* / metabolism
  • Ribosomes* / metabolism

Substances

  • RNA, Messenger
  • RNA, Viral
  • Ribonucleoproteins
  • Eukaryotic Initiation Factor-4G
  • messenger ribonucleoprotein
  • EIF4G1 protein, human
  • Poly(A)-Binding Proteins