Blazed oblique plane microscopy reveals scale-invariant inference of brain-wide population activity

Nat Commun. 2023 Dec 4;14(1):8019. doi: 10.1038/s41467-023-43741-x.

Abstract

Due to the size and opacity of vertebrate brains, it has until now been impossible to simultaneously record neuronal activity at cellular resolution across the entire adult brain. As a result, scientists are forced to choose between cellular-resolution microscopy over limited fields-of-view or whole-brain imaging at coarse-grained resolution. Bridging the gap between these spatial scales of understanding remains a major challenge in neuroscience. Here, we introduce blazed oblique plane microscopy to perform brain-wide recording of neuronal activity at cellular resolution in an adult vertebrate. Contrary to common belief, we find that inferences of neuronal population activity are near-independent of spatial scale: a set of randomly sampled neurons has a comparable predictive power as the same number of coarse-grained macrovoxels. Our work thus links cellular resolution with brain-wide scope, challenges the prevailing view that macroscale methods are generally inferior to microscale techniques and underscores the value of multiscale approaches to studying brain-wide activity.

MeSH terms

  • Brain / diagnostic imaging
  • Brain / physiology
  • Microscopy* / methods
  • Neurons / physiology
  • Neurosciences*