Selective DNA-PK Inhibition Enhances Chemotherapy and Ionizing Radiation Activity in Soft-Tissue Sarcomas

Clin Cancer Res. 2024 Feb 1;30(3):629-637. doi: 10.1158/1078-0432.CCR-23-1531.

Abstract

Purpose: Patients with advanced soft-tissue sarcomas (STS) exhibit a poor prognosis and have few therapeutic options. DNA-dependent protein kinase (DNA-PK) catalytic subunit is a multifunctional serine-threonine protein kinase that plays a crucial role in DNA double-strand damage repair via nonhomologous end joining.

Experimental design: To investigate the therapeutic potential of DNA-PK targeting in STS, we first evaluated the prognostic value of DNA-PK expression in two large cohorts of patients with STS. We then used the potent and selective DNA-PK inhibitor AZD7648 compound to investigate the antitumor effect of the pharmacologic inhibition of DNA-PK in vitro via MTT, apoptosis, cell cycle, and proliferation assays. In vivo studies were performed with patient-derived xenograft models to evaluate the effects of AZD7648 in combination with chemotherapy or ionizing radiation on tumor growth. The mechanisms of sensitivity and resistance to DNA-PK inhibition were investigated by using a genome-wide CRISPR-Cas9 positive screen.

Results: DNA-PK overexpression is significantly associated with poor prognosis in patients with sarcomas. Selective pharmacologic inhibition of DNA-PK strongly synergizes with radiation- and doxorubicin-based regimen in sarcoma models. By using a genome-wide CRISPR-Cas9 positive screen, we identified genes involved in sensitivity to DNA-PK inhibition.

Conclusions: DNA-PK inhibition deserves clinical investigation to improve response to current therapies in patients with sarcoma.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Cell Line, Tumor
  • DNA
  • DNA Repair
  • DNA-Activated Protein Kinase
  • Humans
  • Protein Kinases / genetics
  • Protein Serine-Threonine Kinases / genetics
  • Radiation, Ionizing
  • Sarcoma* / drug therapy
  • Sarcoma* / genetics
  • Sarcoma* / radiotherapy
  • Soft Tissue Neoplasms*

Substances

  • Protein Kinases
  • Protein Serine-Threonine Kinases
  • DNA-Activated Protein Kinase
  • DNA

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