Comparison of cysteine content in whole proteomes across the three domains of life

PLoS One. 2023 Nov 13;18(11):e0294268. doi: 10.1371/journal.pone.0294268. eCollection 2023.

Abstract

An empirical observation suggests that Giardia lamblia proteins have larger cysteine content than their counterparts in other organisms. As this parasite lacks conventional antioxidant stress systems, it is generally accepted that high cysteine content helps G. lamblia cope with oxygen toxicity, a strategy apparently shared by other organisms. Here, we question whether the high cysteine content in some organisms is genuine or just a simple assumption based on singular observations. To this end, we analyzed the cysteine content in 78 proteomes of organisms spanning the three domains of life. The results indicate that the cysteine content in eukaryota is approximately double that in archaea and bacteria, with G. lamblia among the highest. Atypical cysteine contents were found in a few organisms correlating with specific environmental conditions, supporting the evolutionary amino acid-level selection of amino acid composition.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acids / metabolism
  • Biological Evolution
  • Cysteine* / metabolism
  • Eukaryota / metabolism
  • Giardia lamblia*
  • Proteome / metabolism

Substances

  • Cysteine
  • Proteome
  • Amino Acids

Grants and funding

This work was supported by the E022 program from the Instituto Nacional de Pediatría under grant 034/2018 (JOH). The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript.