Potential PDE4B inhibitors as promising candidates against SARS-CoV-2 infection

Biomol Concepts. 2023 Nov 1;14(1). doi: 10.1515/bmc-2022-0033. eCollection 2023 Jan 1.

Abstract

Severe acute respiratory syndrome coronavirus-2 (SARS-CoV-2) is an RNA virus belonging to the coronavirus family responsible for coronavirus disease 2019 (COVID-19). It primarily affects the pulmonary system, which is the target of chronic obstructive pulmonary disease (COPD), for which many new compounds have been developed. In this study, phosphodiesterase 4 (PDE4) inhibitors are being investigated. The inhibition of PDE4 enzyme produces anti-inflammatory and bronchodilator effects in the lung by inducing an increase in cAMP concentrations. Piclamilast and rolipram are known selective inhibitors of PDE4, which are unfortunately endowed with common side effects, such as nausea and emesis. The selective inhibition of the phosphodiesterase 4B (PDE4B) subtype may represent an intriguing technique for combating this highly contagious disease with fewer side effects. In this article, molecular docking studies for the selective inhibition of the PDE4B enzyme have been carried out on 21 in-house compounds. The compounds were docked into the pocket of the PDE4B catalytic site, and in most cases, they were almost completely superimposed onto piclamilast. Then, in order to enlarge our study, drug-likeness prediction studies were performed on the compounds under study.

Keywords: COVID-19; PDE4B; SARS-CoV-2; drug-likeness predictions; molecular docking; phosphodiesterases; piclamilast; rolipram.

MeSH terms

  • COVID-19*
  • Cyclic Nucleotide Phosphodiesterases, Type 4 / genetics
  • Humans
  • Molecular Docking Simulation
  • Phosphodiesterase 4 Inhibitors* / pharmacology
  • SARS-CoV-2

Substances

  • Cyclic Nucleotide Phosphodiesterases, Type 4
  • PDE4B protein, human
  • Phosphodiesterase 4 Inhibitors
  • piclamilast