Shotgun Proteomic-Based Approach with a Q-Exactive Hybrid Quadrupole-Orbitrap High-Resolution Mass Spectrometer for Protein Adductomics on a 3D Human Brain Tumor Neurospheroid Culture Model: The Identification of Adduct Formation in Calmodulin-Dependent Protein Kinase-2 and Annexin-A1 Induced by Pesticide Mixture

J Proteome Res. 2023 Dec 1;22(12):3811-3832. doi: 10.1021/acs.jproteome.3c00484. Epub 2023 Oct 31.

Abstract

Pesticides are increasingly used in combinations in crop protection, resulting in enhanced toxicities for various organisms. Although protein adductomics is challenging, it remains a powerful bioanalytical tool to check environmental exposure and characterize xenobiotic adducts as putative toxicity biomarkers with high accuracy, facilitated by recent advances in proteomic methodologies and a mass spectrometry high-throughput technique. The present study aims to predict the potential neurotoxicity effect of imidacloprid and λ-cyhalothrin insecticides on human neural cells. Our protocol consisted first of 3D in vitro developing neurospheroids derived from human brain tumors and then treatment by pesticide mixture. Furthermore, we adopted a bottom-up proteomic-based approach using nanoflow ultraperformance liquid chromatography coupled with a high-resolution mass spectrometer for protein-adduct analysis with prediction of altered sites. Two proteins were selected, namely, calcium-calmodulin-dependent protein kinase-II (CaMK2) and annexin-A1 (ANXA1), as key targets endowed with primordial roles. De novo sequencing revealed several adduct formations in the active site of 82-ANXA1 and 228-CaMK2 as a result of neurotoxicity, predicted by the added mass shifts for the structure of electrophilic precursors. To the best of our knowledge, our study is the first to adopt a proteomic-based approach to investigate in depth pesticide molecular interactions and their potential to adduct proteins which play a crucial role in the neurotoxicity mechanism.

Keywords: brain tumors; neurospheroids; neurotoxicity; peptide sequencing; protein adductomics; tandem mass spectrometry; toxicity biomarkers; untargeted-proteomic-based approach.

MeSH terms

  • Annexin A1*
  • Brain Neoplasms*
  • Calcium-Calmodulin-Dependent Protein Kinases
  • Humans
  • Mass Spectrometry / methods
  • Pesticides*
  • Proteins
  • Proteomics / methods

Substances

  • Pesticides
  • Annexin A1
  • Proteins
  • Calcium-Calmodulin-Dependent Protein Kinases