Characteristics of the Accessible Chromatin Landscape and Transcriptome under Different Temperature Stresses in Bemisia tabaci

Genes (Basel). 2023 Oct 23;14(10):1978. doi: 10.3390/genes14101978.

Abstract

Bemisia tabaci is an important invasive pest with worldwide distribution and strong temperature tolerance. Previous studies have shown that temperature tolerance varies significantly between the different invasive populations. Several key factors involved in epigenetic regulation have been identified and verified in B. tabaci; therefore, epigenetic adaptation mechanisms may also exist. This study aimed to detect changes in the chromatin accessibility landscape and genome-wide transcriptome under different temperature stresses in B. tabaci. Assay for transposase-accessible chromatin with high-throughput sequencing and RNA-seq analyses indicated that transcriptional activity of the genes strongly correlates with chromatin accessibility. Chromatin transcription-activated gene expression regulation is dominant during high-temperature stress in B. tabaci, mainly through the transcriptional repression of genes related to low-temperature stress resistance. Furthermore, B. tabaci resists low-temperature stress by regulating enzyme activities and withstands high-temperature stress by regulating metabolism and synthesis of organic substances, both achieved by altering chromatin accessibility. In summary, this study provides a theoretical basis for exploring changes in gene expression and chromatin accessibility under different temperature stresses, offering a new approach to unravelling regulatory mechanisms underlying the onset of molecular regulation in response to various temperature stress conditions.

Keywords: chromatin accessibility; epigenetic regulation; temperature stress; tolerance.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Chromatin* / genetics
  • Epigenesis, Genetic
  • Gene Expression Regulation
  • Temperature
  • Transcriptome* / genetics

Substances

  • Chromatin

Grants and funding

This work was supported by the National Natural Science Foundation of China (32072494), Tian-Shan Talent Program (2022TSYCCX0084), the Agricultural Science and Technology Innovation Program (XBZX-04), the Shanxi Province Fundamental Research Project (202203021212165), and the Shanxi Province Higher Education Technology Innovation Project (2022L363).