Parallel evolution of picobirnaviruses from distinct ancestral origins

Microbiol Spectr. 2023 Dec 12;11(6):e0269323. doi: 10.1128/spectrum.02693-23. Epub 2023 Oct 27.

Abstract

Picobirnaviruses (PBVs) are highly heterogeneous viruses encoding a capsid and RdRp. Detected in a wide variety of animals with and without disease, their association with gastrointestinal and respiratory infections, and consequently their public health importance, has rightly been questioned. Determining the "true" host of Picobirnavirus lies at the center of this debate, as evidence exists for them having both vertebrate and prokaryotic origins. Using integrated and time-stamped phylogenetic approaches, we show they are contemporaneous viruses descending from two different ancestors: avian Reovirus and fungal Partitivirus. The fungal PBV-R2 species emerged with a single segment (RdRp) until it acquired a capsid from vertebrate PBV-R1 and PBV-R3 species. Protein and RNA folding analyses revealed how the former came to resemble the latter over time. Thus, parallel evolution from disparate hosts has driven the adaptation and genetic diversification of the Picobirnaviridae family.

Keywords: Picobirnavirus; RdRp; adaptive divergence; capsid; convergent evolution; functional divergence.

MeSH terms

  • Animals
  • Capsid Proteins / genetics
  • Feces
  • Phylogeny
  • Picobirnavirus* / genetics
  • RNA Virus Infections* / veterinary
  • RNA-Dependent RNA Polymerase / genetics

Substances

  • Capsid Proteins
  • RNA-Dependent RNA Polymerase