Synthesis and chemical transformations of glycol nucleic acid (GNA) nucleosides

Bioorg Chem. 2023 Dec:141:106921. doi: 10.1016/j.bioorg.2023.106921. Epub 2023 Oct 17.

Abstract

Xeno nucleic acids (XNA) are an increasingly important class of hypermodified nucleic acids with great potential in bioorganic chemistry and synthetic biology. Glycol nucleic acid (GNA) is constructed from a three-carbon 1,2-propanediol (propylene glycol) backbone attached to a nucleobase entity, representing the simplest known XNA. This review is intended to present GNA nucleosides from a synthetic chemistry perspective-a perspective that serves as a starting point for biological studies. Therefore this account focuses on synthetic methods for GNA nucleoside synthesis, as well as their postsynthetic chemical transformations. The properties and biological activity of GNA constituents are also highlighted. A literature survey shows four major approaches toward GNA nucleoside scaffold synthesis. These approaches pertain to glycidol ring-opening, Mitsunobu, SN2, and dihydroxylation reactions. The general arsenal of reactions used in GNA chemistry is versatile and encompasses the Sonogashira reaction, Michael addition, silyl-Hilbert-Johnson reaction, halogenation, alkylation, cyclization, Rh-catalyzed N-allylation, Sharpless catalytic dihydroxylation, and Yb(OTf)3-catalyzed etherification. Additionally, various phosphorylation reactions have enabled the synthesis of diverse types of GNA nucleotides, dinucleoside phosphates, phosphordiamidites, and oligos. Furthermore, recent advances in GNA chemistry have resulted in the synthesis of previously unknown redox-active (ferrocenyl) and luminescent (pyrenyl and phenanthrenyl) GNA nucleosides, which are also covered in this review.

Keywords: Biological activity; Chemical transformations; Glycol nucleic acid; Synthesis; Xeno nucleic acid.

Publication types

  • Review
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Glycols / chemistry
  • Nucleic Acids* / chemistry
  • Nucleosides / chemistry
  • Nucleotides
  • Propylene Glycol

Substances

  • Nucleic Acids
  • Nucleosides
  • Glycols
  • Nucleotides
  • Propylene Glycol