Oxford nanopore next generation sequencing in a front-line clinical microbiology laboratory without on-site bioinformaticians

Affiliations

• ¹ Department of Microbiology and Molecular Pathology, Wellington Southern Community Laboratories, Wellington, New Zealand; Infection Prevention and Control Committee, Wellington Regional Hospital, Wellington, New Zealand. Electronic address: Maxim.bloomfield@ccdhb.org.nz.
• ² Department of Microbiology and Molecular Pathology, Wellington Southern Community Laboratories, Wellington, New Zealand.
• ³ Genomics and Bioinformatics, Institute of Environmental Science and Research, Kenepuru Science Centre, Wellington, New Zealand.