Global Acetylomics of Campylobacter jejuni Shows Lysine Acetylation Regulates CadF Adhesin Processing and Human Fibronectin Binding

J Proteome Res. 2023 Nov 3;22(11):3519-3533. doi: 10.1021/acs.jproteome.3c00391. Epub 2023 Oct 13.

Abstract

Lysine acetylation (KAc) is a reversible post-translational modification (PTM) that can alter protein structure and function; however, specific roles for KAc are largely undefined in bacteria. Acetyl-lysine immunoprecipitation and LC-MS/MS identified 5567 acetylated lysines on 1026 proteins from the gastrointestinal pathogen Campylobacter jejuni (∼63% of the predicted proteome). KAc was identified on proteins from all subcellular locations, including the outer membrane (OM) and extracellular proteins. Label-based LC-MS/MS identified proteins and KAc sites during growth in 0.1% sodium deoxycholate (DOC, a component of gut bile salts). 3410 acetylated peptides were quantified, and 784 (from 409 proteins) were differentially abundant in DOC growth. Changes in KAc involved multiple pathways, suggesting a dynamic role for this PTM in bile resistance. As observed elsewhere, we show KAc is primarily nonenzymatically mediated via acetyl-phosphate; however, the deacetylase CobB also contributes to a global elevation of this modification in DOC. We observed several multiply acetylated OM proteins and altered DOC abundance of acetylated peptides in the fibronectin (Fn)-binding adhesin CadF. We show KAc reduces CadF Fn binding and prevalence of lower mass variants. This study provides the first system-wide lysine acetylome of C. jejuni and contributes to our understanding of KAc as an emerging PTM in bacteria.

Keywords: CadF; CobB; adhesin; bacterial virulence; lysine acetylation; membrane proteins; post-translational modifications.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Acetylation
  • Adhesins, Bacterial / genetics
  • Adhesins, Bacterial / metabolism
  • Campylobacter jejuni* / metabolism
  • Chromatography, Liquid
  • Fibronectins
  • Humans
  • Lysine* / metabolism
  • Peptides / metabolism
  • Protein Processing, Post-Translational
  • Proteome / genetics
  • Proteome / metabolism
  • Tandem Mass Spectrometry

Substances

  • Lysine
  • Fibronectins
  • Adhesins, Bacterial
  • Peptides
  • Proteome