Visualizing Molecular Dynamics by High-Speed Atomic Force Microscopy

Methods Mol Biol. 2024:2694:355-372. doi: 10.1007/978-1-0716-3377-9_17.

Abstract

Dynamic processes and structural changes of biological molecules are essential to life. While conventional atomic force microscopy (AFM) is able to visualize molecules and supramolecular assemblies at sub-nanometer resolution, it cannot capture dynamics because of its low imaging rate. The introduction of high-speed atomic force microscopy (HS-AFM) solved this problem by providing a large increase in imaging velocity. Using HS-AFM, one is able to visualize dynamic molecular events with high spatiotemporal resolution under near-to physiological conditions. This approach opened new windows as finally dynamics of biomolecules at sub-nanometer resolution could be studied. Here we describe the working principles and an operation protocol for HS-AFM imaging and characterization of biological samples in liquid.

Keywords: Atomic force microscope (AFM); Biological applications; Cantilever; High-speed AFM; Intermittent contact; Single molecule.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Microscopy, Atomic Force / methods
  • Molecular Dynamics Simulation*