Estimating the true stability of the prehydrolytic outward-facing state in an ABC protein

Elife. 2023 Oct 2:12:e90736. doi: 10.7554/eLife.90736.

Abstract

CFTR, the anion channel mutated in cystic fibrosis patients, is a model ABC protein whose ATP-driven conformational cycle is observable at single-molecule level in patch-clamp recordings. Bursts of CFTR pore openings are coupled to tight dimerization of its two nucleotide-binding domains (NBDs) and in wild-type (WT) channels are mostly terminated by ATP hydrolysis. The slow rate of non-hydrolytic closure - which determines how tightly bursts and ATP hydrolysis are coupled - is unknown, as burst durations of catalytic site mutants span a range of ~200-fold. Here, we show that Walker A mutation K1250A, Walker B mutation D1370N, and catalytic glutamate mutations E1371S and E1371Q all completely disrupt ATP hydrolysis. True non-hydrolytic closing rate of WT CFTR approximates that of K1250A and E1371S. That rate is slowed ~15-fold in E1371Q by a non-native inter-NBD H-bond, and accelerated ~15-fold in D1370N. These findings uncover unique features of the NBD interface in human CFTR.

Keywords: D-loop; composite ATP-binding site; flickery closure; molecular biophysics; mutant cycle; structural biology; xenopus; zebrafish.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Adenosine Triphosphate* / metabolism
  • Catalytic Domain
  • Cystic Fibrosis Transmembrane Conductance Regulator* / metabolism
  • Humans
  • Ion Channel Gating
  • Mutation

Substances

  • Cystic Fibrosis Transmembrane Conductance Regulator
  • Adenosine Triphosphate

Grants and funding

The funders had no role in study design, data collection, and interpretation, or the decision to submit the work for publication.