Mutated TP53 in Circulating Tumor DNA as a Risk Level Biomarker in Head and Neck Squamous Cell Carcinoma Patients

Biomolecules. 2023 Sep 20;13(9):1418. doi: 10.3390/biom13091418.

Abstract

Circulating tumor DNA (ctDNA) has been suggested as a surrogate biomarker for early detection of cancer recurrence. We aimed to explore the utility of ctDNA as a noninvasive prognostic biomarker in newly diagnosed head and neck squamous cell carcinoma (HNSCC) patients. Seventy HNSCC specimens were analysed for the detection of TP53 genetic alterations utilizing next-generation sequencing (NGS). TP53 mutations were revealed in 55 (79%). Upon detection of a significant TP53 mutation, circulating cell-free DNA was scrutinized for the presence of the tumor-specific mutation. ctDNA was identified at a minimal allele frequency of 0.08% in 21 out of 30 processed plasma samples. Detectable ctDNA correlated with regional spread (N stage ≥ 1, p = 0.011) and poorer 5-year progression-free survival (20%, 95% CI 10.9 to 28.9, p = 0.034). The high-risk worst pattern of invasion (WPOI grade 4-5) and deep invasion were frequently found in patients whose ctDNA was detected (p = 0.087 and p = 0.072, respectively). Detecting mutated TP53 ctDNA was associated with poor progression-free survival and regional metastases, indicating its potential role as a prognostic biomarker. However, ctDNA detectability in early-stage disease and the mechanisms modulating its release into the bloodstream must be further elucidated.

Keywords: TP53; adjuvant therapy; circulating tumor DNA; head and neck squamous cell carcinoma; next-generation sequencing.

MeSH terms

  • Biomarkers
  • Cell-Free Nucleic Acids*
  • Circulating Tumor DNA* / genetics
  • Head and Neck Neoplasms* / diagnosis
  • Head and Neck Neoplasms* / genetics
  • Humans
  • Squamous Cell Carcinoma of Head and Neck / genetics
  • Tumor Suppressor Protein p53 / genetics

Substances

  • Circulating Tumor DNA
  • Cell-Free Nucleic Acids
  • Biomarkers
  • TP53 protein, human
  • Tumor Suppressor Protein p53

Grants and funding

This research received no external funding.