Dysregulation of the progranulin-driven autophagy-lysosomal pathway mediates secretion of the nuclear protein TDP-43

J Biol Chem. 2023 Nov;299(11):105272. doi: 10.1016/j.jbc.2023.105272. Epub 2023 Sep 20.

Abstract

The cytoplasmic accumulation of the nuclear protein transactive response DNA-binding protein 43 kDa (TDP-43) has been linked to the progression of amyotrophic lateral sclerosis and frontotemporal lobar degeneration. TDP-43 secreted into the extracellular space has been suggested to contribute to the cell-to-cell spread of the cytoplasmic accumulation of TDP-43 throughout the brain; however, the underlying mechanisms remain unknown. We herein demonstrated that the secretion of TDP-43 was stimulated by the inhibition of the autophagy-lysosomal pathway driven by progranulin (PGRN), a causal protein of frontotemporal lobar degeneration. Among modulators of autophagy, only vacuolar-ATPase inhibitors, such as bafilomycin A1 (Baf), increased the levels of the full-length and cleaved forms of TDP-43 and the autophagosome marker LC3-II (microtubule-associated proteins 1A/1B light chain 3B) in extracellular vesicle fractions prepared from the culture media of HeLa, SH-SY5Y, or NSC-34 cells, whereas vacuolin-1, MG132, chloroquine, rapamycin, and serum starvation did not. The C-terminal fragment of TDP-43 was required for Baf-induced TDP-43 secretion. The Baf treatment induced the translocation of the aggregate-prone GFP-tagged C-terminal fragment of TDP-43 and mCherry-tagged LC3 to the plasma membrane. The Baf-induced secretion of TDP-43 was attenuated in autophagy-deficient ATG16L1 knockout HeLa cells. The knockdown of PGRN induced the secretion of cleaved TDP-43 in an autophagy-dependent manner in HeLa cells. The KO of PGRN in mouse embryonic fibroblasts increased the secretion of the cleaved forms of TDP-43 and LC3-II. The treatment inducing TDP-43 secretion increased the nuclear translocation of GFP-tagged transcription factor EB, a master regulator of the autophagy-lysosomal pathway in SH-SY5Y cells. These results suggest that the secretion of TDP-43 is promoted by dysregulation of the PGRN-driven autophagy-lysosomal pathway.

Keywords: TAR DNA-binding protein 43; amyotrophic lateral sclerosis; autolysosome; autophagosome; autophagy; extracellular vesicles; frontotemporal lobar degeneration; lysosome; progranulin.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Autophagosomes / drug effects
  • Autophagosomes / metabolism
  • Autophagy* / drug effects
  • Autophagy* / genetics
  • Autophagy-Related Proteins / genetics
  • Autophagy-Related Proteins / metabolism
  • DNA-Binding Proteins* / genetics
  • DNA-Binding Proteins* / metabolism
  • Enzyme Inhibitors / pharmacology
  • Extracellular Vesicles / metabolism
  • Gene Expression Regulation / drug effects
  • HeLa Cells
  • Humans
  • Intercellular Signaling Peptides and Proteins / genetics
  • Intercellular Signaling Peptides and Proteins / metabolism
  • Lysosomes* / metabolism
  • Microtubule-Associated Proteins / genetics
  • Microtubule-Associated Proteins / metabolism
  • Progranulins* / genetics
  • Progranulins* / metabolism

Substances

  • DNA-Binding Proteins
  • Intercellular Signaling Peptides and Proteins
  • Progranulins
  • TDP-43 protein, mouse
  • benzyloxycarbonylleucyl-leucyl-leucine aldehyde
  • bafilomycin A1
  • MAP1LC3B protein, human
  • Microtubule-Associated Proteins
  • Enzyme Inhibitors
  • ATG16L1 protein, human
  • Autophagy-Related Proteins