BCL11B and the NuRD complex cooperatively guard T-cell fate and inhibit OPA1-mediated mitochondrial fusion in T cells

EMBO J. 2023 Nov 2;42(21):e113448. doi: 10.15252/embj.2023113448. Epub 2023 Sep 22.

Abstract

The nucleosome remodeling and histone deacetylase (NuRD) complex physically associates with BCL11B to regulate murine T-cell development. However, the function of NuRD complex in mature T cells remains unclear. Here, we characterize the fate and metabolism of human T cells in which key subunits of the NuRD complex or BCL11B are ablated. BCL11B and the NuRD complex bind to each other and repress natural killer (NK)-cell fate in T cells. In addition, T cells upregulate the NK cell-associated receptors and transcription factors, lyse NK-cell targets, and are reprogrammed into NK-like cells (ITNKs) upon deletion of MTA2, MBD2, CHD4, or BCL11B. ITNKs increase OPA1 expression and exhibit characteristically elongated mitochondria with augmented oxidative phosphorylation (OXPHOS) activity. OPA1-mediated elevated OXPHOS enhances cellular acetyl-CoA levels, thereby promoting the reprogramming efficiency and antitumor effects of ITNKs via regulating H3K27 acetylation at specific targets. In conclusion, our findings demonstrate that the NuRD complex and BCL11B cooperatively maintain T-cell fate directly by repressing NK cell-associated transcription and indirectly through a metabolic-epigenetic axis, providing strategies to improve the reprogramming efficiency and antitumor effects of ITNKs.

Keywords: CHD4; MBD2; MTA2; OPA1; T-cell fate.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • DNA-Binding Proteins / genetics
  • DNA-Binding Proteins / metabolism
  • GTP Phosphohydrolases / genetics
  • GTP Phosphohydrolases / metabolism
  • Histone Deacetylases / genetics
  • Histone Deacetylases / metabolism
  • Histones*
  • Humans
  • Mi-2 Nucleosome Remodeling and Deacetylase Complex* / genetics
  • Mice
  • Mitochondrial Dynamics
  • Repressor Proteins / genetics
  • Repressor Proteins / metabolism
  • T-Lymphocytes / metabolism
  • Transcription Factors / metabolism
  • Tumor Suppressor Proteins / metabolism

Substances

  • BCL11B protein, human
  • DNA-Binding Proteins
  • GTP Phosphohydrolases
  • Histone Deacetylases
  • Histones
  • MBD2 protein, human
  • Mi-2 Nucleosome Remodeling and Deacetylase Complex
  • MTA2 protein, human
  • OPA1 protein, human
  • Repressor Proteins
  • Transcription Factors
  • Tumor Suppressor Proteins
  • HDAC1 protein, human