Klebsiella phage KP34gp57 capsular depolymerase structure and function: from a serendipitous finding to the design of active mini-enzymes against K. pneumoniae

mBio. 2023 Oct 31;14(5):e0132923. doi: 10.1128/mbio.01329-23. Epub 2023 Sep 14.

Abstract

In this work, we determined the structure of Klebsiella phage KP34p57 capsular depolymerase and dissected the role of individual domains in trimerization and functional activity. The crystal structure serendipitously revealed that the enzyme can exist in a monomeric state once deprived of its C-terminal domain. Based on the crystal structure and site-directed mutagenesis, we localized the key catalytic residues in an intra-subunit deep groove. Consistently, we show that C-terminally trimmed KP34p57 variants are monomeric, stable, and fully active. The elaboration of monomeric, fully active phage depolymerases is innovative in the field, as no previous example exists. Indeed, mini phage depolymerases can be combined in chimeric enzymes to extend their activity ranges, allowing their use against multiple serotypes.

Keywords: capsule depolymerase; carbohydrate degrading enzymes; crystal structure; mini-enzyme; phage-borne enzyme.

MeSH terms

  • Bacteriophages* / genetics
  • Klebsiella pneumoniae / genetics
  • Klebsiella* / genetics