Chromosome level genome assembly of oriental armyworm Mythimna separata

Sci Data. 2023 Sep 8;10(1):597. doi: 10.1038/s41597-023-02506-3.

Abstract

The oriental armyworm, Mythimna separata, is an extremely destructive polyphagous pest with a broad host range that seriously threatens the safety of agricultural production. Here, a high-quality chromosome-level genome was assembled using Illumina, PacBio HiFi long sequencing, and Hi-C scaffolding technologies. The genome size was 706.30 Mb with a contig N50 of 22.08 Mb, and 99.2% of the assembled sequences were anchored to 31 chromosomes. In addition, 20,375 protein-coding genes and 258.68 Mb transposable elements were identified. The chromosome-level genome assembly of M. separata provides a significant genetic resource for future studies of this insect and contributes to the development of management strategies.

Publication types

  • Dataset

MeSH terms

  • Agriculture
  • Animals
  • DNA Transposable Elements*
  • Genome, Insect*
  • Spodoptera* / genetics

Substances

  • DNA Transposable Elements