Applying fluorescence spectroscopy and DNA pyrosequencing with 2D-COS and co-occurrence network to deconstruct dynamical DOM degradation of air-land-water sources in an urban river

Abstract

In an urban river, comprehending the interplay between dissolved organic matter (DOM) and atmospheric, terrestrial, and aquatic sources is crucial. This encompassed investigating temporal variations in DOM and its association with the bacterioplankton community to gain profound insights into the biogeochemical dynamics and biodegradability of DOM. DOM was extracted from PM2.5, soil, sediment, bait, and terrestrial/aquatic plant residuals collected along the Wenyuhe River in Beijing, China - a region predominantly supplied with reclaimed water. Subsequently, mixed microbial communities from the river were introduced into DOM samples originating from each source and incubated for 10 days. Principal component analysis (PCA) applied to reassembled excitation-emission matrix (EEM) data revealed two distinct clusters: cluster 1 comprising soil, sediment, and PM2.5 samples; and cluster 2 consisting of bait as well as terrestrial/aquatic plant residuals. According to parallel factor analysis, C1 (microbial humic-like) and C2-C3 (fulvic-like) dominated the DOM from soil, sediment, and PM2.5. These components were continuously degraded during incubation, except for PM2.5. DOM from bait and terrestrial/aquatic plants contained representative components of C6 (phenolic-like) and C7 (tryptophan-like), which underwent extensive decomposition. Interestingly, DOM in PM2.5 contained aliphatic compounds and polycyclic aromatic hydrocarbons (PAHs) but exhibited weak degradation with the complete disappearance of C6 and C7. Rhodococcus was a unique species capable of degrading PAHs, which might be particularly important considering the specificity of PM2.5 pollution. Based on two-dimensional correlation spectroscopy (2D-COS), variations in DOM components such as C6, and C7 were significantly larger compared to those of C1, C2, C3, and C5 (terrestrial humic-like) from bait samples, sediments, and residual terrestrial plants. MW-2D-COS analysis revealed that DOM from bait samples and terrestrial/aquatic plants experienced substantial degradation by the second day while DOM from soil or sediment decomposed mainly on the fourth day. Notably, the decomposition of DOM fractions in PM2.5 occurred throughout the entire four-day period. Co-occurrence network analysis classified sources of DOM into two clusters similar to PCA results: cluster 1 showed significant microbial degradation of fulvic-like compounds while cluster 2 demonstrated deep microbial decomposition of tyrosine-like and phenolic compounds. Therefore, the artificial loading of DOM into rivers not only expands the chemical diversity within DOM but also perturbs bacterioplankton diversities.

Keywords: Bacterioplankton; DOM; Fluorescence spectroscopy; PM2.5; Urban river.