Re-investigation of functional gastrointestinal disorders utilizing a machine learning approach

Elahe Mousavi; Ammar Hasanzadeh Keshteli; Mohammadreza Sehhati; Ahmad Vaez; Peyman Adibi

doi:10.1186/s12911-023-02270-9

Re-investigation of functional gastrointestinal disorders utilizing a machine learning approach

BMC Med Inform Decis Mak. 2023 Aug 26;23(1):167. doi: 10.1186/s12911-023-02270-9.

Authors

Elahe Mousavi¹, Ammar Hasanzadeh Keshteli², Mohammadreza Sehhati³, Ahmad Vaez², Peyman Adibi⁴

Affiliations

¹ Department of Bioelectrics and Biomedical Engineering, School of Advanced Technologies in Medicine, Isfahan University of Medical Sciences, Isfahan, Iran.
² Department of Bioinformatics, School of Advanced Technologies in Medicine, Isfahan University of Medical Sciences, Hezar Jerib Street, Po Box 8174673461, Isfahan, Iran.
³ Department of Bioinformatics, School of Advanced Technologies in Medicine, Isfahan University of Medical Sciences, Hezar Jerib Street, Po Box 8174673461, Isfahan, Iran. mr.sehhati@amt.mui.ac.ir.
⁴ Integrative Functional Gastroenterology and Hepatology Research Center, Department of Internal Medicine, School of Medicine, Isfahan University of Medical Sciences, Isfahan, Iran.

Abstract

Background: Functional gastrointestinal disorders (FGIDs), as a group of syndromes with no identified structural or pathophysiological biomarkers, are currently classified by Rome criteria based on gastrointestinal symptoms (GI). However, the high overlap among FGIDs in patients makes treatment and identifying underlying mechanisms challenging. Furthermore, disregarding psychological factors in the current classification, despite their approved relationship with GI symptoms, underlines the necessity of more investigation into grouping FGID patients. We aimed to provide more homogenous and well-separated clusters based on both GI and psychological characteristics for patients with FGIDs using an unsupervised machine learning algorithm.

Methods: Based on a cross-sectional study, 3765 (79%) patients with at least one FGID were included in the current study. In the first step, the clustering utilizing a machine learning algorithm was merely executed based on GI symptoms. In the second step, considering the previous step's results and focusing on the clusters with a diverse combination of GI symptoms, the clustering was re-conducted based on both GI symptoms and psychological factors.

Results: The first phase clustering of all participants based on GI symptoms resulted in the formation of pure and non-pure clusters. Pure clusters exactly illustrated the properties of most pure Rome syndromes. Re-clustering the members of the non-pure clusters based on GI and psychological factors (i.e., the second clustering step) resulted in eight new clusters, indicating the dominance of multiple factors but well-discriminated from other clusters. The results of the second step especially highlight the impact of psychological factors in grouping FGIDs.

Conclusions: In the current study, the existence of Rome disorders, which were previously defined by expert opinion-based consensus, was approved, and, eight new clusters with multiple dominant symptoms based on GI and psychological factors were also introduced. The more homogeneous clusters of patients could lead to the design of more precise clinical experiments and further targeted patient care.

Keywords: Cluster analysis; FGID; Functional gastrointestinal disorders; Rome criteria; Unsupervised machine learning.

Publication types

Research Support, Non-U.S. Gov't

MeSH terms

Cross-Sectional Studies
Gastrointestinal Diseases* / diagnosis
Humans
Machine Learning*
Syndrome
Unsupervised Machine Learning