Boundary bypass activity in the abdominal-B region of the Drosophila bithorax complex is position dependent and regulated

Open Biol. 2023 Aug;13(8):230035. doi: 10.1098/rsob.230035. Epub 2023 Aug 16.

Abstract

Expression of Abdominal-B (Abd-B) in abdominal segments A5-A8 is controlled by four regulatory domains, iab-5-iab-8. Each domain has an initiator element (which sets the activity state), elements that maintain this state and tissue-specific enhancers. To ensure their functional autonomy, each domain is bracketed by boundary elements (Mcp, Fab-7, Fab-7 and Fab-8). In addition to blocking crosstalk between adjacent regulatory domains, the Fab boundaries must also have bypass activity so the relevant regulatory domains can 'jump over' intervening boundaries and activate the Abd-B promoter. In the studies reported here we have investigated the parameters governing bypass activity. We find that the bypass elements in the Fab-7 and Fab-8 boundaries must be located in the regulatory domain that is responsible for driving Abd-B expression. We suggest that bypass activity may also be subject to regulation.

Keywords: Fab-6; Fab-7; chromatin boundary; enhancer–promoter interaction; insulator; regulation of distance interactions.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • Drosophila Proteins* / genetics
  • Drosophila Proteins* / metabolism
  • Drosophila melanogaster* / genetics
  • Drosophila melanogaster* / metabolism
  • Homeodomain Proteins* / genetics
  • Homeodomain Proteins* / metabolism
  • Promoter Regions, Genetic
  • Regulatory Sequences, Nucleic Acid

Substances

  • Drosophila Proteins
  • Homeodomain Proteins
  • Abd-B proteins, Drosophila

Associated data

  • figshare/10.6084/m9.figshare.c.6760113