RNA-Based Control of Fungal Pathogens in Plants

Int J Mol Sci. 2023 Aug 3;24(15):12391. doi: 10.3390/ijms241512391.

Abstract

Our duty to conserve global natural ecosystems is increasingly in conflict with our need to feed an expanding population. The use of conventional pesticides not only damages the environment and vulnerable biodiversity but can also still fail to prevent crop losses of 20-40% due to pests and pathogens. There is a growing call for more ecologically sustainable pathogen control measures. RNA-based biopesticides offer an eco-friendly alternative to the use of conventional fungicides for crop protection. The genetic modification (GM) of crops remains controversial in many countries, though expression of transgenes inducing pathogen-specific RNA interference (RNAi) has been proven effective against many agronomically important fungal pathogens. The topical application of pathogen-specific RNAi-inducing sprays is a more responsive, GM-free approach to conventional RNAi transgene-based crop protection. The specific targeting of essential pathogen genes, the development of RNAi-nanoparticle carrier spray formulations, and the possible structural modifications to the RNA molecules themselves are crucial to the success of this novel technology. Here, we outline the current understanding of gene silencing pathways in plants and fungi and summarize the pioneering and recent work exploring RNA-based biopesticides for crop protection against fungal pathogens, with a focus on spray-induced gene silencing (SIGS). Further, we discuss factors that could affect the success of RNA-based control strategies, including RNA uptake, stability, amplification, and movement within and between the plant host and pathogen, as well as the cost and design of RNA pesticides.

Keywords: RNA carriers; RNA interference (RNAi); crop protection; cross-kingdom RNAi; fungal pathogens; gene silencing; host-induced gene silencing (HIGS); spray-induced gene silencing (SIGS); topical RNAi.

Publication types

  • Review

MeSH terms

  • Biological Control Agents*
  • Crops, Agricultural / genetics
  • Ecosystem
  • Pesticides*
  • Plant Diseases / genetics
  • Plant Diseases / microbiology
  • Plant Diseases / prevention & control
  • RNA Interference
  • RNA, Small Interfering / genetics

Substances

  • Biological Control Agents
  • RNA, Small Interfering
  • Pesticides