Roseovarius pelagicus sp. nov., a facultatively anaerobic bacterium with potential for degrading polypropylene, isolated from Arctic seawater

Int J Syst Evol Microbiol. 2023 Aug;73(8). doi: 10.1099/ijsem.0.005999.

Abstract

A Gram-stain-negative, facultatively anaerobic, non-motile, rod-shaped bacterial strain, designated HL-MP18T, was isolated from Arctic seawater after a prolonged incubation employing polypropylene as the sole carbon source. Phylogenetic analyses of the 16S rRNA gene sequence revealed that strain HL-MP18T was affiliated to the genus Roseovarius with close relatives Roseovarius carneus LXJ103T (96.8 %) and Roseovarius litorisediminis KCTC 32327T (96.5 %). The complete genome sequence of strain HL-MP18T comprised a circular chromosome of 3.86 Mbp and two circular plasmids of 0.17 and 0.24 Mbp. Genomic comparisons based on average nucleotide identity and digital DNA-DNA hybridization showed that strain HL-MP18T was consistently discriminated from its closely related taxa in the genus Roseovarius. Strain HL-MP18T showed optimal growth at 25 °C, pH 7.0 and 2.5 % (w/v) sea salts. The major cellular fatty acids were C18 : 1 ω6c and/or C18 : 1 ω7c (49.6 %), C19 : 0 cyclo ω8c (13.5 %), and C16 : 0 (12.8 %). The major respiratory quinone was ubiquinone-10. The polar lipids consisted of phosphatidylcholine, phosphatidylglycerol, an unidentified aminolipid and three unidentified lipids. The genomic DNA G+C content of the strain was 59.2 mol%. The phylogenetic, genomic, phenotypic and chemotaxonomic results indicate that strain HL-MP18T is distinguishable from the recognized species of the genus Roseovarius. Therefore, we propose that strain HL-MP18T represents a novel species belonging to the genus Roseovarius, for which the name Roseovarius pelagicus sp. nov. is proposed. The type strain is HL-MP18T (=KCCM 90405T=JCM 35639T).

Keywords: Arctic seawater; Roseovarius pelagicus; new species; polypropylene.

MeSH terms

  • Arctic Regions
  • Genome, Bacterial / genetics
  • Gram-Negative Anaerobic Bacteria* / classification
  • Gram-Negative Anaerobic Bacteria* / genetics
  • Gram-Negative Anaerobic Bacteria* / isolation & purification
  • Phylogeny
  • Polypropylenes* / metabolism
  • RNA, Ribosomal, 16S / genetics
  • Rhodobacteraceae* / classification
  • Rhodobacteraceae* / enzymology
  • Rhodobacteraceae* / genetics
  • Rhodobacteraceae* / isolation & purification
  • Species Specificity

Substances

  • Polypropylenes
  • RNA, Ribosomal, 16S