Investigating the composition and recruitment of the mycobacterial ImuA'-ImuB-DnaE2 mutasome

Elife. 2023 Aug 2:12:e75628. doi: 10.7554/eLife.75628.

Abstract

A DNA damage-inducible mutagenic gene cassette has been implicated in the emergence of drug resistance in Mycobacterium tuberculosis during anti-tuberculosis (TB) chemotherapy. However, the molecular composition and operation of the encoded 'mycobacterial mutasome' - minimally comprising DnaE2 polymerase and ImuA' and ImuB accessory proteins - remain elusive. Following exposure of mycobacteria to DNA damaging agents, we observe that DnaE2 and ImuB co-localize with the DNA polymerase III β subunit (β clamp) in distinct intracellular foci. Notably, genetic inactivation of the mutasome in an imuBAAAAGG mutant containing a disrupted β clamp-binding motif abolishes ImuB-β clamp focus formation, a phenotype recapitulated pharmacologically by treating bacilli with griselimycin and in biochemical assays in which this β clamp-binding antibiotic collapses pre-formed ImuB-β clamp complexes. These observations establish the essentiality of the ImuB-β clamp interaction for mutagenic DNA repair in mycobacteria, identifying the mutasome as target for adjunctive therapeutics designed to protect anti-TB drugs against emerging resistance.

Keywords: Mycobacterium smegmatis; Mycobacterium tuberculosis; anti-evolution; antibiotic resistance; biochemistry; chemical biology; induced mutagenesis; infectious disease; microbiology; mutasome.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Antitubercular Agents / pharmacology
  • Bacterial Proteins* / chemistry
  • DNA Repair
  • Mutagenesis
  • Mycobacterium tuberculosis* / genetics

Substances

  • Bacterial Proteins
  • Antitubercular Agents

Associated data

  • Dryad/10.5061/dryad.76hdr7szc