Stability of Multi-Parametric Prostate MRI Radiomic Features to Variations in Segmentation

J Pers Med. 2023 Jul 22;13(7):1172. doi: 10.3390/jpm13071172.

Abstract

Stability analysis remains a fundamental step in developing a successful imaging biomarker to personalize oncological strategies. This study proposes an in silico contour generation method for simulating segmentation variations to identify stable radiomic features. Ground-truth annotation provided for the whole prostate gland on the multi-parametric MRI sequences (T2w, ADC, and SUB-DCE) were perturbed to mimic segmentation differences observed among human annotators. In total, we generated 15 synthetic contours for a given image-segmentation pair. One thousand two hundred twenty-four unfiltered/filtered radiomic features were extracted applying Pyradiomics, followed by stability assessment using ICC(1,1). Stable features identified in the internal population were then compared with an external population to discover and report robust features. Finally, we also investigated the impact of a wide range of filtering strategies on the stability of features. The percentage of unfiltered (filtered) features that remained robust subjected to segmentation variations were T2w-36% (81%), ADC-36% (94%), and SUB-43% (93%). Our findings suggest that segmentation variations can significantly impact radiomic feature stability but can be mitigated by including pre-filtering strategies as part of the feature extraction pipeline.

Keywords: multi-parametric MRI; prostate; radiomics.

Grants and funding

This work was supported by “5 per 1000” funds (Italian Ministry of Health 2016—financial support for healthcare research), title of the project “Microstructural evaluation of prostate cancer by multiparametric magnetic resonance” to “Nicola Nicolai” and by Fondazione Italo Monzino. The APC by “5 per 1000” funds (Italian Ministry of Health 2016—financial support for healthcare research).