Ribonucleoprotein Granules: Between Stress and Transposable Elements

Biomolecules. 2023 Jun 23;13(7):1027. doi: 10.3390/biom13071027.

Abstract

Transposable elements (TEs) are DNA sequences that can transpose and replicate within the genome, leading to genetic changes that affect various aspects of host biology. Evolutionarily, hosts have also developed molecular mechanisms to suppress TEs at the transcriptional and post-transcriptional levels. Recent studies suggest that stress-induced formation of ribonucleoprotein (RNP) granules, including stress granule (SG) and processing body (P-body), can play a role in the sequestration of TEs to prevent transposition, suggesting an additional layer of the regulatory mechanism for TEs. RNP granules have been shown to contain factors involved in RNA regulation, including mRNA decay enzymes, RNA-binding proteins, and noncoding RNAs, which could potentially contribute to the regulation of TEs. Therefore, understanding the interplay between TEs and RNP granules is crucial for elucidating the mechanisms for maintaining genomic stability and controlling gene expression. In this review, we provide a brief overview of the current knowledge regarding the interplay between TEs and RNP granules, proposing RNP granules as a novel layer of the regulatory mechanism for TEs during stress.

Keywords: P-body; RNP granules; post-transcriptional regulation; retrotransposon; stress granule; transposable element.

Publication types

  • Review
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Cytoplasmic Ribonucleoprotein Granules
  • DNA Transposable Elements* / genetics
  • RNA-Binding Proteins* / metabolism

Substances

  • DNA Transposable Elements
  • RNA-Binding Proteins

Grants and funding

This work was supported by the National Research Foundation of Korea (NRF) grant funded by the Korean government (MSIT): (2020R1C1C1009253) given to S.N. and (2023R1A2C1003209) given to S.M. In addition, this work was supported by the 2021 Research Grant from Kangwon National University: (520210047) given to S.N. and (520210046) given to S.M. This study also received support from the Regional Innovation Strategy (RIS) through the National Research Foundation of Korea (NRF) funded by the Ministry of Education (MOE) (2022RIS-005).