USF1-mediated ALKBH5 stabilizes FLII mRNA in an m6A-YTHDF2-dependent manner to repress glycolytic activity in prostate adenocarcinoma

Mol Carcinog. 2023 Nov;62(11):1700-1716. doi: 10.1002/mc.23609. Epub 2023 Jul 26.

Abstract

Upstream-stimulating factor 1 (USF1) is a ubiquitously expressed transcription factor implicated in multiple cellular processes, including metabolism and proliferation. This study focused on the function of USF1 in glycolysis and the malignant development of prostate adenocarcinoma (PRAD). Bioinformatics predictions suggested that USF1 is poorly expressed in PRAD. The clinical PRAD samples revealed a low level of USF1, which was correlated with an unfavorable prognosis. Artificial upregulation of USF1 significantly repressed glycolytic activity in PRAD cells and reduced cell growth and metastasis in vitro and in vivo. Potential downstream genes of USF1 were probed by integrated bioinformatics analyses. The chromatin immunoprecipitation and luciferase assays indicated that USF1 bound to the α-ketoglutarate-dependent dioxygenase alkB homolog 5 (ALKBH5) promoter for transcription activation. Flightless I (FLII) was identified as the gene showing the highest degree of correlation with ALKBH5. As an m6A demethylase, ALKBH5 enhanced FLII mRNA stability by inducing m6A demethylation in an m6A-YTH N6-methyladenosine RNA-binding protein F2 (YTHDF2)-dependent manner. Either silencing of ALKBH5 or FLII blocked the role of USF1 in PARD cells and restored glycolysis, cell proliferation, and invasion. This study demonstrates that USF1 activates ALKBH5 to stabilize FLII mRNA in an m6A-YTHDF2-dependent manner, thereby repressing glycolysis processes and the progression of PRAD.

Keywords: ALKBH5; FLII; USF1; glycolysis; m6A modification; prostate adenocarcinoma.

MeSH terms

  • Adenocarcinoma* / genetics
  • AlkB Homolog 5, RNA Demethylase / genetics
  • Antibodies
  • Glycolysis / genetics
  • Humans
  • Male
  • Microfilament Proteins
  • Prostate*
  • RNA-Binding Proteins
  • Trans-Activators
  • Transcription Factors
  • Transcriptional Activation
  • Upstream Stimulatory Factors / genetics

Substances

  • Transcription Factors
  • Antibodies
  • FLII protein, human
  • Microfilament Proteins
  • Trans-Activators
  • USF1 protein, human
  • Upstream Stimulatory Factors
  • ALKBH5 protein, human
  • AlkB Homolog 5, RNA Demethylase
  • YTHDF2 protein, human
  • RNA-Binding Proteins