The wavelength of microwave is longer than that of lightwave, causing the interferometric optical path difference induced by the measurand changes to be relatively smaller than that of microwave, which results in the lower sensitivity of sapphire fiber Fabry-Perot interferometer (FPI) sensor in microwave band. To improve sensitivity, a parallel FPI sensing system is constructed, in which a section of sapphire fiber connected to a single-mode transmission fiber is used as a sensing FPI, and a single-mode fiber (SMF) with a slightly different optical path from a sensing FPI is utilized as a reference FPI. By connecting two FPIs in parallel, Vernier effect is formed to improve sensitivity. The influence of relationship between the optical path difference of the reference FPI and the sensing FPI on the sensitivity amplification factor is analyzed based on the microwave interference spectrum of the parallel FPI. A section of sapphire fiber with the length of 8 cm is used as temperature sensor to construct high-temperature sensing system. The results demonstrate that the temperature sensitivity reaches about 2338.68kHz/°C, which is approximately 130 times higher than that of the sensing FPI alone. Furthermore, when the difference of optical path between the sensing FPI and the reference FPI is kept constant while the sensing FPI is unchanged, the amplification factor of the temperature sensitivity is approximately 2.64 times higher with longer length of the reference FPI compared to the situation with shorter length of the reference FPI.