Characterization of a novel cysteine-less Cu/Zn-superoxide dismutase in Paenibacillus lautus missing a conserved disulfide bond

J Biol Chem. 2023 Aug;299(8):105040. doi: 10.1016/j.jbc.2023.105040. Epub 2023 Jul 11.

Abstract

Cu/Zn-superoxide dismutase (CuZnSOD) is an enzyme that binds a copper and zinc ion and also forms an intramolecular disulfide bond. Together with the copper ion as the active site, the disulfide bond is completely conserved among these proteins; indeed, the disulfide bond plays critical roles in maintaining the catalytically competent conformation of CuZnSOD. Here, we found that a CuZnSOD protein in Paenibacillus lautus (PaSOD) has no Cys residue but exhibits a significant level of enzyme activity. The crystal structure of PaSOD revealed hydrophobic and hydrogen-bonding interactions in substitution for the disulfide bond of the other CuZnSOD proteins. Also notably, we determined that PaSOD forms a homodimer through an additional domain with a novel fold at the N terminus. While the advantages of lacking Cys residues and adopting a novel dimer configuration remain obscure, PaSOD does not require a disulfide-introducing/correcting system for maturation and could also avoid misfolding caused by aberrant thiol oxidations under an oxidative environment.

Keywords: crystal structure; dimerization; disulfide; gram-positive bacteria; superoxide dismutase.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Bacterial Proteins* / chemistry
  • Copper
  • Cysteine
  • Disulfides* / chemistry
  • Paenibacillus
  • Protein Folding
  • Superoxide Dismutase-1* / chemistry
  • Zinc

Substances

  • Copper
  • Cysteine
  • Disulfides
  • Superoxide Dismutase-1
  • Zinc
  • Bacterial Proteins

Supplementary concepts

  • Paenibacillus lautus