Structure of puromycin-sensitive aminopeptidase and polyglutamine binding

PLoS One. 2023 Jul 13;18(7):e0287086. doi: 10.1371/journal.pone.0287086. eCollection 2023.

Abstract

Puromycin-sensitive aminopeptidase (E.C. 3.4.11.14, UniProt P55786), a zinc metallopeptidase belonging to the M1 family, degrades a number of bioactive peptides as well as peptides released from the proteasome, including polyglutamine. We report the crystal structure of PSA at 2.3 Ǻ. Overall, the enzyme adopts a V-shaped architecture with four domains characteristic of the M1 family aminopeptidases, but it is in a less compact conformation compared to most M1 enzymes of known structure. A microtubule binding sequence is present in a C-terminal HEAT repeat domain of the enzyme in a position where it might serve to mediate interaction with tubulin. In the catalytic metallopeptidase domain, an elongated active site groove lined with aromatic and hydrophobic residues and a large S1 subsite may play a role in broad substrate recognition. The structure with bound polyglutamine shows a possible interacting mode of this peptide, which is supported by mutation.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, U.S. Gov't, Non-P.H.S.

MeSH terms

  • Aminopeptidases* / metabolism
  • Binding Sites
  • Metalloproteases / metabolism
  • Peptides*
  • Substrate Specificity

Substances

  • enkephalin degrading enzyme
  • polyglutamine
  • Aminopeptidases
  • Peptides
  • Metalloproteases