Heme protonation affects iron-NO binding in the NO transport protein nitrophorin

J Inorg Biochem. 2023 Sep:246:112281. doi: 10.1016/j.jinorgbio.2023.112281. Epub 2023 Jun 10.

Abstract

The nitrophorins (NPs) comprise an unusual group of heme proteins with stable ferric heme iron nitric oxide (Fe-NO) complexes. They are found in the salivary glands of the blood-sucking kissing bug Rhodnius prolixus, which uses the NPs to transport the highly reactive signaling molecule NO. Nuclear resonance vibrational spectroscopy (NRVS) of both isoform NP2 and a mutant NP2(Leu132Val) show, after addition of NO, a strong structured vibrational band at around 600 cm-1, which is due to modes with significant Fe-NO bending and stretching contribution. Based on a hybrid calculation method, which uses density functional theory and molecular mechanics, it is demonstrated that protonation of the heme carboxyl groups does influence both the vibrational properties of the Fe-NO entity and its electronic ground state. Moreover, heme protonation causes a significant increase of the gap between the highest occupied and lowest unoccupied molecular orbital by almost one order of magnitude leading to a stabilization of the Fe-NO bond.

Keywords: Density functional theory; Heme; Nitric oxide; Nitrophorin; Nuclear inelastic scattering; Nuclear resonance vibrational spectroscopy.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • Carrier Proteins / metabolism
  • Heme / chemistry
  • Hemeproteins* / chemistry
  • Iron / chemistry
  • Nitric Oxide / metabolism
  • Rhodnius* / chemistry
  • Rhodnius* / metabolism
  • Salivary Proteins and Peptides

Substances

  • nitrophorin
  • Heme
  • Carrier Proteins
  • Nitric Oxide
  • Salivary Proteins and Peptides
  • Hemeproteins
  • Iron