Design, Synthesis, Characterization and Computational Studies of Mannich Bases Oxadiazole Derivatives as New Class of Jack Bean Urease Inhibitors

Chem Biodivers. 2023 Aug;20(8):e202300241. doi: 10.1002/cbdv.202300241. Epub 2023 Jul 26.

Abstract

Mannich bases consisting of 1,3,4-oxadiazole-2-thione (3 a-3 l) bearing various substituents were synthesized and found potent jack bean urease inhibitors. The prepared compounds showed significantly good inhibitory activities with IC50 values from 9.45±0.05 to 267.42±0.23 μM. The compound 3 k containing 4-chlorophenyl (-R) and 4-hydroxyphenyl (-R') was most active with IC50 9.45±0.05 μM followed by 3 e (IC50 22.52±0.15 μM) in which -R was phenyl and -R' was isopropyl group. However, when both -R and -R' were either 4-chlorophenyl groups (3 l) or only -R' was 4-nitrophenyl (3 i), both compounds were found inactive. The detailed binding affinities of the produced compounds with protein were explored through molecular docking and data-supported in-vitro enzyme inhibition profiles. Drug likeness was confirmed by in silico ADME investigations and molecular orbital analysis (HOMO-LUMO) and electrostatic potential maps were got from DFT calculations. ESP maps exposed that there are two potential binding sites with the most positive and most negative parts.

Keywords: 1,3,4-oxadiazole-2-thione; Mannich bases; molecular docking; urease inhibitors.

MeSH terms

  • Canavalia
  • Enzyme Inhibitors* / chemistry
  • Mannich Bases / pharmacology
  • Molecular Docking Simulation
  • Molecular Structure
  • Oxadiazoles / chemistry
  • Oxadiazoles / pharmacology
  • Structure-Activity Relationship
  • Urease*

Substances

  • Enzyme Inhibitors
  • Urease
  • Oxadiazoles
  • Mannich Bases