A community effort for COVID-19 Ontology Harmonization

CEUR Workshop Proc. 2022:3073:122-127. Epub 2022 Jan 28.

Abstract

Ontologies have emerged to become critical to support data and knowledge representation, standardization, integration, and analysis. The SARS-CoV-2 pandemic led to the rapid proliferation of COVID-19 data, as well as the development of many COVID-19 ontologies. In the interest of supporting data interoperability, we initiated a community-based effort to harmonize COVID-19 ontologies. Our effort involves the collaborative discussion among developers of seven COVID-19 related ontologies, and the merging of four ontologies. This effort demonstrates the feasibility of harmonizing these ontologies in an interoperable framework to support integrative representation and analysis of COVID-19 related data and knowledge.

Keywords: COVID-19; Knowledge integration; SARS-CoV-2; harmonization; ontology.