Host-specific sensing of coronaviruses and picornaviruses by the CARD8 inflammasome

PLoS Biol. 2023 Jun 8;21(6):e3002144. doi: 10.1371/journal.pbio.3002144. eCollection 2023 Jun.

Abstract

Hosts have evolved diverse strategies to respond to microbial infections, including the detection of pathogen-encoded proteases by inflammasome-forming sensors such as NLRP1 and CARD8. Here, we find that the 3CL protease (3CLpro) encoded by diverse coronaviruses, including Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2), cleaves a rapidly evolving region of human CARD8 and activates a robust inflammasome response. CARD8 is required for cell death and the release of pro-inflammatory cytokines during SARS-CoV-2 infection. We further find that natural variation alters CARD8 sensing of 3CLpro, including 3CLpro-mediated antagonism rather than activation of megabat CARD8. Likewise, we find that a single nucleotide polymorphism (SNP) in humans reduces CARD8's ability to sense coronavirus 3CLpros and, instead, enables sensing of 3C proteases (3Cpro) from select picornaviruses. Our findings demonstrate that CARD8 is a broad sensor of viral protease activities and suggests that CARD8 diversity contributes to inter- and intraspecies variation in inflammasome-mediated viral sensing and immunopathology.

MeSH terms

  • Apoptosis Regulatory Proteins / metabolism
  • CARD Signaling Adaptor Proteins / metabolism
  • COVID-19*
  • Humans
  • Inflammasomes / metabolism
  • Neoplasm Proteins / metabolism
  • Picornaviridae* / genetics
  • Picornaviridae* / metabolism
  • Protease Inhibitors
  • SARS-CoV-2 / metabolism

Substances

  • Inflammasomes
  • Protease Inhibitors
  • Apoptosis Regulatory Proteins
  • CARD8 protein, human
  • Neoplasm Proteins
  • CARD Signaling Adaptor Proteins