EPIC-0307-mediated selective disruption of PRADX-EZH2 interaction and enhancement of temozolomide sensitivity to glioblastoma via inhibiting DNA repair and MGMT

Neuro Oncol. 2023 Nov 2;25(11):1976-1988. doi: 10.1093/neuonc/noad102.

Abstract

Background: Temozolomide (TMZ) treatment efficacy in glioblastoma (GBM) has been limited by resistance. The level of O-6-methylguanine-DNA methyltransferase (MGMT) and intrinsic DNA damage repair factors are important for the TMZ response in patients. Here, we reported a novel compound, called EPIC-0307, that increased TMZ sensitivity by inhibiting specific DNA damage repair proteins and MGMT expression.

Methods: EPIC-0307 was derived by molecular docking screening. RNA immunoprecipitation (RIP), and chromatin immunoprecipitation by RNA (ChIRP) assays were used to verify the blocking effect. Chromatin immunoprecipitation (ChIP) and co-immunoprecipitation (Co-IP) assays were performed to explore the mechanism of EPIC-0307. A series of in vivo and in vitro experiments were designed to evaluate the efficacy of EPIC-0307 in sensitizing GBM cells to TMZ.

Results: EPIC-0307 selectively disrupted the binding of PRADX to EZH2 and upregulated the expression of P21 and PUMA, leading to cell cycle arrest and apoptosis in GBM cells. EPIC-0307 exhibited a synergistic inhibitory effect on GBM when combined with TMZ by downregulating TMZ-induced DNA damage repair responses and epigenetically silencing MGMT expression through modulating the recruitment of ATF3-pSTAT3-HDAC1 regulatory complex to the MGMT promoter. EPIC-0307 demonstrated significant efficacy in suppressing the tumorigenesis of GBM cells, restoring TMZ sensitivity.

Conclusion: This study identified a potential small-molecule inhibitor (SMI) EPIC-0307 that selectively disrupted the PRADX-EZH2 interaction to upregulate expressions of tumor suppressor genes, thereby exerting its antitumor effects on GBM cells. EPIC-0307 treatment also increased the chemotherapeutic efficacy of TMZ by epigenetically downregulating DNA repair-associate genes and MGMT expression in GBM cells.

Keywords: DNA repair; MGMT; glioblastoma; small-molecule inhibitor; temozolomide.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Antineoplastic Agents, Alkylating / therapeutic use
  • Cell Line, Tumor
  • DNA Modification Methylases / genetics
  • DNA Repair
  • DNA Repair Enzymes / genetics
  • Drug Resistance, Neoplasm
  • Enhancer of Zeste Homolog 2 Protein / genetics
  • Glioblastoma* / pathology
  • Humans
  • Molecular Docking Simulation
  • O(6)-Methylguanine-DNA Methyltransferase / genetics
  • O(6)-Methylguanine-DNA Methyltransferase / metabolism
  • O(6)-Methylguanine-DNA Methyltransferase / pharmacology
  • RNA / pharmacology
  • RNA / therapeutic use
  • Temozolomide / therapeutic use
  • Tumor Suppressor Proteins / genetics

Substances

  • Temozolomide
  • Antineoplastic Agents, Alkylating
  • DNA Repair Enzymes
  • O(6)-Methylguanine-DNA Methyltransferase
  • DNA Modification Methylases
  • RNA
  • EZH2 protein, human
  • Enhancer of Zeste Homolog 2 Protein
  • MGMT protein, human
  • Tumor Suppressor Proteins