Identification of Paired-related Homeobox Protein 1 as a key mesenchymal transcription factor in pulmonary fibrosis

Elife. 2023 Jun 1:12:e79840. doi: 10.7554/eLife.79840.

Abstract

Matrix remodeling is a salient feature of idiopathic pulmonary fibrosis (IPF). Targeting cells driving matrix remodeling could be a promising avenue for IPF treatment. Analysis of transcriptomic database identified the mesenchymal transcription factor PRRX1 as upregulated in IPF. PRRX1, strongly expressed by lung fibroblasts, was regulated by a TGF-β/PGE2 balance in vitro in control and IPF human lung fibroblasts, while IPF fibroblast-derived matrix increased PRRX1 expression in a PDGFR-dependent manner in control ones. PRRX1 inhibition decreased human lung fibroblast proliferation by downregulating the expression of S phase cyclins. PRRX1 inhibition also impacted TGF-β driven myofibroblastic differentiation by inhibiting SMAD2/3 phosphorylation through phosphatase PPM1A upregulation and TGFBR2 downregulation, leading to TGF-β response global decrease. Finally, targeted inhibition of Prrx1 attenuated fibrotic remodeling in vivo with intra-tracheal antisense oligonucleotides in bleomycin mouse model of lung fibrosis and ex vivo using human and mouse precision-cut lung slices. Our results identified PRRX1 as a key mesenchymal transcription factor during lung fibrogenesis.

Keywords: TGF beta pathway; cell biology; fibroblasts; fibrosis; human; lung; mouse; transcription factors.

MeSH terms

  • Animals
  • Cell Proliferation
  • Homeodomain Proteins / genetics
  • Humans
  • Idiopathic Pulmonary Fibrosis* / genetics
  • Idiopathic Pulmonary Fibrosis* / metabolism
  • Mice
  • Protein Phosphatase 2C
  • Transcription Factors*
  • Transforming Growth Factor beta / metabolism

Substances

  • Transcription Factors
  • Transforming Growth Factor beta
  • Homeodomain Proteins
  • PRRX1 protein, human
  • PPM1A protein, human
  • Protein Phosphatase 2C

Associated data

  • GEO/GSE161364
  • GEO/GSE2052
  • GEO/GSE24206
  • GEO/GSE21411