Enhanced metabolism of 2,3',4,4',5-pentachlorobiphenyl (CB118) by bacterial cytochrome P450 monooxygenase mutants of Bacillus megaterium

Sci Total Environ. 2023 Sep 10:890:164475. doi: 10.1016/j.scitotenv.2023.164475. Epub 2023 May 29.

Abstract

Bacterial cytochrome P450 monooxygenase P450BM3 is a promising enzyme to provide novel substrate specificity and enhanced enzymatic activity. The wild type (WT) has been shown to metabolize the widely distributed polychlorinated biphenyl (PCB) 2,3',4,4',5-pentachlorobiphenyl (CB118) to hydroxylated metabolites. However, this reaction requires the coexistence of perfluoroalkyl carboxylic acids (PFCAs). To locate P450BM3 mutants metabolizing CB118 without PFCAs, mutations were selected from amino acids comprising the substrate-binding cavity and the substrate entrance. The mutant A264G showed enhanced hydroxylation activities compared to the WT for the production of five hydroxylated metabolites. Perfluorooctanoic acid addition provided the highest activity, as found in the WT. The docking model of A264G and CB118 indicated that the enlargement of the space above the heme brought CB118 close to the heme, resulting in high activity. In contrast, the mutants L188Q, QG, LVQ, and GVQ, which contain the L188Q mutation, showed higher activity than WT even without PFCAs. Docking models revealed that the closed form found in substrate binding was induced by the L188Q mutation in the substrate non-binding state of the mutants. These mutants are promising for bioremediation of PCBs using enhanced metabolizing activities.

Keywords: Docking model; Hydroxylation; Mutation; P450BM3; Perfluoroalkyl carboxylic acid; Polychlorinated biphenyl.

MeSH terms

  • Bacillus megaterium* / genetics
  • Bacillus megaterium* / metabolism
  • Bacterial Proteins / genetics
  • Bacterial Proteins / metabolism
  • Cytochrome P-450 Enzyme System / genetics
  • Cytochrome P-450 Enzyme System / metabolism
  • Heme / metabolism
  • Hydroxylation
  • Polychlorinated Biphenyls* / metabolism

Substances

  • 2,3',4,4',5-pentachlorobiphenyl
  • Cytochrome P-450 Enzyme System
  • Polychlorinated Biphenyls
  • Heme
  • Bacterial Proteins