Application of transcriptomics and proteomics in pulmonary arterial hypertension

Per Med. 2023 Mar;20(2):183-192. doi: 10.2217/pme-2023-0020. Epub 2023 May 17.

Abstract

The onset and progression of pulmonary arterial hypertension (PAH), a malignant disease, are associated with environmental and epigenetic factors. Recent advancements in transcriptomics and proteomics technology have provided new insights into PAH and identified novel gene targets involved in the development of the disease. Transcriptomic analysis has led to the discovery of possible novel pathways, such as miR-483 targeting several PAH-related genes and a mechanistic link between the increase in HERV-K mRNA and protein. Proteomic analysis has revealed crucial details, including the loss of SIRT3 activity and the significance of the CLIC4/Arf6 pathway in PAH pathogenesis. Gene profiles and protein interaction networks of PAH have been analyzed, clarifying the roles of differentially expressed genes or proteins in the occurrence and development of PAH. This article discusses these recent advances.

Keywords: epigenetics; precision medicine; proteomics; pulmonary arterial hypertension; transcriptomics.

Publication types

  • Review
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Chloride Channels / genetics
  • Chloride Channels / metabolism
  • Gene Expression Profiling
  • Humans
  • Hypertension, Pulmonary* / genetics
  • Hypertension, Pulmonary* / metabolism
  • Proteomics
  • Pulmonary Arterial Hypertension* / genetics
  • Pulmonary Arterial Hypertension* / pathology
  • Transcriptome / genetics

Substances

  • CLIC4 protein, human
  • Chloride Channels