Epigenome wide association study in peripheral blood of pregnant women identifies potential metabolic pathways related to gestational diabetes

Epigenetics. 2023 Dec;18(1):2211369. doi: 10.1080/15592294.2023.2211369.

Abstract

Gestational diabetes mellitus (GDM) increases the risk of developing metabolic disorders in both pregnant women and their offspring. Factors such as nutrition or the intrauterine environment may play an important role, through epigenetic mechanisms, in the development of GDM. The aim of this work is to identify epigenetic marks involved in the mechanisms or pathways related to gestational diabetes. A total of 32 pregnant women were selected, 16 of them with GDM and 16 non-GDM. DNA methylation pattern was obtained from Illumina Methylation Epic BeadChip, from peripheral blood samples at the diagnostic visit (26-28 weeks). Differential methylated positions (DMPs) were extracted using ChAMP and limma package in R 2.9.10, with a threshold of FDR <0.05, deltabeta >|5|% and B >0. A total of 1.141 DMPs were found, and 714 were annotated in genes. A functional analysis was performed, and we found 23 genes significantly related to carbohydrate metabolism. Finally, a total of 27 DMPs were correlated with biochemical variables such as glucose levels at different points of oral glucose tolerance test, fasting glucose, cholesterol, HOMAIR and HbA1c, at different visits during pregnancy and postpartum. Our results show that there is a differentiated methylation pattern between GDM and non-GDM. Furthermore, the genes annotated to the DMPs could be implicated in the development of GDM as well as in alterations in related metabolic variables.

Keywords: Epigenome-wide association; Gestational diabetes mellitus; diabetes; epigenetics; glucose homoeostasis; metabolism.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • DNA Methylation
  • Diabetes, Gestational* / genetics
  • Epigenome
  • Female
  • Glucose
  • Humans
  • Metabolic Networks and Pathways
  • Pregnancy
  • Pregnant Women

Substances

  • Glucose

Grants and funding

This study was supported by the Juan Rodés program from “Instituto de Salud Carlos III” (JR20-00040 to MM-V), Miguel Servet Type I program from the ISCIII-Madrid, Spain (CP20/00066 to CG-R), PFIS program (FI19/00178 to TML-P), Garantía Juvenil program (POEJ-0039-18) from Ministerio de trabajo y economía social de España, and the Nicolas Monardes Program from the “Servicio Andaluz de Salud, Junta de Andalucía”, Spain (RC-0008-2021 to SM). In addition, this study was supported by the “Centros de Investigación Biomédica en Red” (CIBER) of the Institute of Health Carlos III (ISCIII) (CB06/03/0018) and research grants from the ISCIII (PI18/01175, PI21/01864) and from “Servicio Andaluz de Salud”, Junta de Andalucía (PI-0283-2018, PI-0419-2019). This study has been co-funded by FEDER funds (“A way to make Europe”).