Transcription by the Three RNA Polymerases under the Control of the TOR Signaling Pathway in Saccharomyces cerevisiae

Biomolecules. 2023 Apr 3;13(4):642. doi: 10.3390/biom13040642.

Abstract

Ribosomes are the basis for protein production, whose biogenesis is essential for cells to drive growth and proliferation. Ribosome biogenesis is highly regulated in accordance with cellular energy status and stress signals. In eukaryotic cells, response to stress signals and the production of newly-synthesized ribosomes require elements to be transcribed by the three RNA polymerases (RNA pols). Thus, cells need the tight coordination of RNA pols to adjust adequate components production for ribosome biogenesis which depends on environmental cues. This complex coordination probably occurs through a signaling pathway that links nutrient availability with transcription. Several pieces of evidence strongly support that the Target of Rapamycin (TOR) pathway, conserved among eukaryotes, influences the transcription of RNA pols through different mechanisms to ensure proper ribosome components production. This review summarizes the connection between TOR and regulatory elements for the transcription of each RNA pol in the budding yeast Saccharomyces cerevisiae. It also focuses on how TOR regulates transcription depending on external cues. Finally, it discusses the simultaneous coordination of the three RNA pols through common factors regulated by TOR and summarizes the most important similarities and differences between S. cerevisiae and mammals.

Keywords: RNA polymerases; Saccharomyces cerevisiae; TOR pathway; ribosome biogenesis; transcription.

Publication types

  • Review
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • DNA-Directed RNA Polymerases / metabolism
  • Mammals / metabolism
  • RNA / metabolism
  • Saccharomyces cerevisiae Proteins* / genetics
  • Saccharomyces cerevisiae Proteins* / metabolism
  • Saccharomyces cerevisiae* / genetics
  • Saccharomyces cerevisiae* / metabolism
  • Signal Transduction / physiology
  • Sirolimus / metabolism

Substances

  • Sirolimus
  • Saccharomyces cerevisiae Proteins
  • DNA-Directed RNA Polymerases
  • RNA

Grants and funding

This work has been supported by grants from the Spanish Ministry of Science and Innovation (MCIN) and ERDF (PID2020-112853GB-C33), the Junta de Andalucía-Universidad de Jaén (FEDER-UJA 1260360) and the Junta de Andalucía (P20-00792 and BIO258) to F.N.G.; F.G.-S. is a recipient of predoctoral and postdoctoral fellowships from the Universidad de Jaén.