Association between INHA gene polymorphisms and litter size in Hainan black goats

PeerJ. 2023 May 9:11:e15381. doi: 10.7717/peerj.15381. eCollection 2023.

Abstract

Background: The inhibin alpha (INHA) gene is one of the important genes affecting the reproductive traits of animals. Hainan black goats are the main goat breed in Hainan Island (China), whose development is limited by low reproductive performance. However, the relationship between INHA gene and the reproductive performance of Hainan black goats is still unclear. Therefore, the purpose of this work was to explore the effect of INHA gene polymorphisms on the litter size of Hainan black goats.

Methods: Single nucleotide polymorphisms (SNPs) of INHA were detected, and the genetic parameters and haplotype frequency of these SNPs were calculated and association analysis was performed for these SNPs with the litter size. Finally, the SNP with significant correlations to litter size was analyzed by Bioinformatics tools.

Results: The results showed that the litter size of individuals with the AC genotype at loci g.28317663A>C of INHA gene was significantly higher than those with the AA genotype. This SNP changed the amino acid sequence, which may affect the function of INHA protein by affecting its structure. Our results suggest that g.28317663A>C loci may serve as a potential molecular marker for improving the reproductive traits in Hainan black goats.

Keywords: Hainan black goats; INHA gene; Litter size; Polymorphism; Reproductive performance.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • Female
  • Goats* / genetics
  • Inhibins / genetics
  • Litter Size / genetics
  • Polymorphism, Single Nucleotide* / genetics
  • Pregnancy
  • Reproduction / genetics

Substances

  • Inhibins

Associated data

  • figshare/10.6084/m9.figshare.22140080.v1

Grants and funding

This research was funded by Academician Innovation Platform Project of Hainan Province (No. YSPTZX202153), Innovation Platform for Academician of Hainan Province, China Modern Agriculture Research System MOF and MARA (CARS-38) and the Natural Science Foundation of Hainan Province (No. 2019RC090). The Article Processing Charge was funded by the Special Funding Projects for Local Science and Technology Development Guided by the Central Committee (ZY2022HN09). The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript.