Field programmable gate array compression for large array multispeckle diffuse correlation spectroscopy

J Biomed Opt. 2023 May;28(5):057001. doi: 10.1117/1.JBO.28.5.057001. Epub 2023 May 8.

Abstract

Significance: Diffuse correlation spectroscopy (DCS) is an indispensable tool for quantifying cerebral blood flow noninvasively by measuring the autocorrelation function (ACF) of the diffused light. Recently, a multispeckle DCS approach was proposed to scale up the sensitivity with the number of independent speckle measurements, leveraging the rapid development of single-photon avalanche diode (SPAD) cameras. However, the extremely high data rate from advanced SPAD cameras is beyond the data transfer rate commonly available and requires specialized high-performance computation to calculate large number of autocorrelators (ACs) for real-time measurements.

Aim: We aim to demonstrate a data compression scheme in the readout field-programmable gate array (FPGA) of a large-pixel-count SPAD camera. On-FPGA, data compression should democratize SPAD cameras and streamline system integration for multispeckle DCS.

Approach: We present a 192×128 SPAD array with 128 linear ACs embedded on an FPGA to calculate 12,288 ACFs in real time.

Results: We achieved a signal-to-noise ratio (SNR) gain of 110 over a single-pixel DCS system and more than threefold increase in SNR with respect to the state-of-the-art multispeckle DCS.

Conclusions: The FPGA-embedded autocorrelation algorithm offers a scalable data compression method to large SPAD array, which can improve the sensitivity and usability of multispeckle DCS instruments.

Keywords: diffuse correlation spectroscopy; field-programmable gate array compression; multispeckle; single-photon avalanche diode.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Algorithms
  • Data Compression*
  • Photons
  • Signal-To-Noise Ratio
  • Spectrum Analysis