Spurious intragenic transcription is a feature of mammalian cellular senescence and tissue aging

Nat Aging. 2023 Apr;3(4):402-417. doi: 10.1038/s43587-023-00384-3. Epub 2023 Mar 30.

Abstract

Mammalian aging is characterized by the progressive loss of tissue function and increased risk for disease. Accumulation of senescent cells in aging tissues partly contributes to this decline, and targeted depletion of senescent cells in vivo ameliorates many age-related phenotypes. The fundamental molecular mechanisms responsible for the decline of cellular health and fitness during senescence and aging are largely unknown. In this study, we investigated whether chromatin-mediated loss of transcriptional fidelity, known to contribute to fitness and survival in yeast and worms, also occurs during human cellular senescence and mouse aging. Our findings reveal aberrant transcription initiation inside genes during senescence and aging that co-occurs with changes in the chromatin landscape. Interventions that alter these spurious transcripts have profound consequences on cellular health, primarily affecting intracellular signal transduction pathways. We propose that age-related spurious transcription promotes a noisy transcriptome and degradation of coherent transcriptional networks.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, Non-U.S. Gov't
  • Research Support, N.I.H., Intramural

MeSH terms

  • Aging* / genetics
  • Animals
  • Cellular Senescence* / genetics
  • Chromatin / genetics
  • Humans
  • Mammals / genetics
  • Mice
  • Phenotype
  • Transcriptome

Substances

  • Chromatin